Examples

Fetch all small tier datasets

uv run ome-iris fetch --tier small

Verify local data

uv run ome-iris verify

Use a custom local data directory

uv run ome-iris fetch --data-dir /tmp/ome-iris-data
uv run ome-iris verify --data-dir /tmp/ome-iris-data

Scaffold a new dataset manifest from an external source path

uv run ome-iris scaffold --source-path /path/to/JUMP_plate_BR00117006

Scaffold and append a starter CSV row

uv run ome-iris scaffold --source-path /path/to/JUMP_plate_BR00117006 --append-csv