Index

A

append() (iceberg_bioimage.publishing.image_assets.SupportsAppend method)

C

catalog_table_to_arrow() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.catalog) CatalogScanOptions (class in iceberg_bioimage) (class in iceberg_bioimage.integrations.catalog) chunk_rows_published (iceberg_bioimage.models.scan_result.WarehouseIngestResult property) (iceberg_bioimage.WarehouseIngestResult property) ContractValidationResult (class in iceberg_bioimage) (class in iceberg_bioimage.models.scan_result)

create_duckdb_connection() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.duckdb) create_ome_arrow() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.ome_arrow) create_table() (iceberg_bioimage.publishing.image_assets.SupportsCatalog method) CytominingWarehouseResult (class in iceberg_bioimage) (class in iceberg_bioimage.models.scan_result)

D

dataset_count (iceberg_bioimage.models.scan_result.WarehouseIngestResult property) (iceberg_bioimage.WarehouseIngestResult property)

DatasetSummary (class in iceberg_bioimage) (class in iceberg_bioimage.models.scan_result)

E

export_catalog_to_cytomining_warehouse() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.cytomining) export_profiles_to_cytomining_warehouse() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.cytomining) export_scan_result_to_cytomining_warehouse() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.cytomining)

export_store_to_cytomining_warehouse() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.cytomining) export_table_to_cytomining_warehouse() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.cytomining)

I

iceberg_bioimage module iceberg_bioimage.api module iceberg_bioimage.integrations.catalog module iceberg_bioimage.integrations.cytomining module iceberg_bioimage.integrations.duckdb module iceberg_bioimage.integrations.ome_arrow module iceberg_bioimage.models.scan_result module iceberg_bioimage.publishing.chunk_index module

iceberg_bioimage.publishing.image_assets module iceberg_bioimage.validation.contracts module image_assets_rows_published (iceberg_bioimage.models.scan_result.WarehouseIngestResult property) (iceberg_bioimage.WarehouseIngestResult property) ImageAsset (class in iceberg_bioimage) (class in iceberg_bioimage.models.scan_result) ingest_scan_results_to_warehouse() (in module iceberg_bioimage) (in module iceberg_bioimage.api) ingest_stores_to_warehouse() (in module iceberg_bioimage) (in module iceberg_bioimage.api) is_valid (iceberg_bioimage.ContractValidationResult property) (iceberg_bioimage.models.scan_result.ContractValidationResult property) (iceberg_bioimage.models.scan_result.WarehouseValidationResult property) (iceberg_bioimage.WarehouseValidationResult property)

J

join_catalog_image_assets_with_profiles() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.catalog) join_image_assets_with_profiles() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.duckdb)

join_profiles_with_scan_result() (in module iceberg_bioimage) (in module iceberg_bioimage.api) join_profiles_with_store() (in module iceberg_bioimage) (in module iceberg_bioimage.api)

L

list_catalog_tables() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.catalog) list_tables() (iceberg_bioimage.integrations.catalog.SupportsScanCatalog method) load_catalog_table() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.catalog) load_profile_column_aliases() (in module iceberg_bioimage) (in module iceberg_bioimage.validation.contracts)

load_table() (iceberg_bioimage.integrations.catalog.SupportsScanCatalog method) (iceberg_bioimage.publishing.image_assets.SupportsCatalog method) (iceberg_bioimage.publishing.image_assets.SupportsLoadTable method) load_warehouse_manifest() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.cytomining)

M

module iceberg_bioimage iceberg_bioimage.api iceberg_bioimage.integrations.catalog iceberg_bioimage.integrations.cytomining iceberg_bioimage.integrations.duckdb iceberg_bioimage.integrations.ome_arrow iceberg_bioimage.models.scan_result iceberg_bioimage.publishing.chunk_index iceberg_bioimage.publishing.image_assets iceberg_bioimage.validation.contracts

P

profile_column_aliases() (in module iceberg_bioimage.validation.contracts) publish_chunk_index() (in module iceberg_bioimage) (in module iceberg_bioimage.publishing.chunk_index)

publish_image_assets() (in module iceberg_bioimage) (in module iceberg_bioimage.publishing.image_assets)

Q

query_metadata_table() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.duckdb)

R

raise_for_invalid_scan_result() (in module iceberg_bioimage.validation.contracts) register_store() (in module iceberg_bioimage) (in module iceberg_bioimage.api)

RegistrationResult (class in iceberg_bioimage) (class in iceberg_bioimage.models.scan_result) resolve_microscopy_profile_columns() (in module iceberg_bioimage.validation.contracts)

S

scan() (iceberg_bioimage.integrations.catalog.SupportsIcebergTable method) scan_ome_arrow() (in module iceberg_bioimage) (in module iceberg_bioimage.integrations.ome_arrow) scan_result_to_chunk_rows() (in module iceberg_bioimage.publishing.chunk_index) scan_result_to_rows() (in module iceberg_bioimage.publishing.image_assets) scan_store() (in module iceberg_bioimage) (in module iceberg_bioimage.api) ScanResult (class in iceberg_bioimage) (class in iceberg_bioimage.models.scan_result)

summarize_scan_result() (in module iceberg_bioimage) (in module iceberg_bioimage.api) summarize_store() (in module iceberg_bioimage) (in module iceberg_bioimage.api) SupportsAppend (class in iceberg_bioimage.publishing.image_assets) SupportsCatalog (class in iceberg_bioimage.publishing.image_assets) SupportsIcebergScan (class in iceberg_bioimage.integrations.catalog) SupportsIcebergTable (class in iceberg_bioimage.integrations.catalog) SupportsLoadTable (class in iceberg_bioimage.publishing.image_assets) SupportsScanCatalog (class in iceberg_bioimage.integrations.catalog)

T

to_arrow() (iceberg_bioimage.integrations.catalog.SupportsIcebergScan method) to_dict() (iceberg_bioimage.ContractValidationResult method) (iceberg_bioimage.CytominingWarehouseResult method) (iceberg_bioimage.DatasetSummary method) (iceberg_bioimage.ImageAsset method) (iceberg_bioimage.models.scan_result.ContractValidationResult method) (iceberg_bioimage.models.scan_result.CytominingWarehouseResult method) (iceberg_bioimage.models.scan_result.DatasetSummary method) (iceberg_bioimage.models.scan_result.ImageAsset method) (iceberg_bioimage.models.scan_result.RegistrationResult method) (iceberg_bioimage.models.scan_result.ScanResult method) (iceberg_bioimage.models.scan_result.WarehouseIngestResult method) (iceberg_bioimage.models.scan_result.WarehouseManifest method) (iceberg_bioimage.models.scan_result.WarehouseTableManifestEntry method) (iceberg_bioimage.models.scan_result.WarehouseValidationResult method) (iceberg_bioimage.RegistrationResult method) (iceberg_bioimage.ScanResult method) (iceberg_bioimage.WarehouseIngestResult method) (iceberg_bioimage.WarehouseManifest method) (iceberg_bioimage.WarehouseTableManifestEntry method) (iceberg_bioimage.WarehouseValidationResult method)

to_json() (iceberg_bioimage.ContractValidationResult method) (iceberg_bioimage.CytominingWarehouseResult method) (iceberg_bioimage.DatasetSummary method) (iceberg_bioimage.models.scan_result.ContractValidationResult method) (iceberg_bioimage.models.scan_result.CytominingWarehouseResult method) (iceberg_bioimage.models.scan_result.DatasetSummary method) (iceberg_bioimage.models.scan_result.RegistrationResult method) (iceberg_bioimage.models.scan_result.ScanResult method) (iceberg_bioimage.models.scan_result.WarehouseIngestResult method) (iceberg_bioimage.models.scan_result.WarehouseManifest method) (iceberg_bioimage.models.scan_result.WarehouseValidationResult method) (iceberg_bioimage.RegistrationResult method) (iceberg_bioimage.ScanResult method) (iceberg_bioimage.WarehouseIngestResult method) (iceberg_bioimage.WarehouseManifest method) (iceberg_bioimage.WarehouseValidationResult method)

V

validate_microscopy_profile_columns() (in module iceberg_bioimage) (in module iceberg_bioimage.validation.contracts) validate_microscopy_profile_table() (in module iceberg_bioimage) (in module iceberg_bioimage.validation.contracts)

validate_scan_result() (in module iceberg_bioimage.validation.contracts) validate_warehouse_manifest() (in module iceberg_bioimage) (in module iceberg_bioimage.validation.contracts)

W

WarehouseIngestResult (class in iceberg_bioimage) (class in iceberg_bioimage.models.scan_result) WarehouseManifest (class in iceberg_bioimage) (class in iceberg_bioimage.models.scan_result)

WarehouseTableManifestEntry (class in iceberg_bioimage) (class in iceberg_bioimage.models.scan_result) WarehouseValidationResult (class in iceberg_bioimage) (class in iceberg_bioimage.models.scan_result)